Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL37231.1Conserved hypothetical protein. (492 aa)    
Predicted Functional Partners:
EFL37230.1
Aminoglycoside phosphotransferase.
 
     0.917
EFL37616.1
Conserved hypothetical protein.
  
     0.708
EFL42388.1
Conserved hypothetical protein.
  
     0.699
EFL41980.1
Integral membrane.
  
     0.642
EFL40403.1
Membrane protein.
  
     0.623
EFL42182.1
ATPase.
  
     0.621
EFL39796.1
Conserved hypothetical protein.
  
     0.616
EFL37232.1
Conserved hypothetical protein.
 
     0.614
EFL39799.1
Conserved hypothetical protein.
  
     0.576
EFL40833.1
Conserved hypothetical protein.
  
     0.558
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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