STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL37253.1Taurine catabolism dioxygenase. (229 aa)    
Predicted Functional Partners:
EFL37801.1
Cyclododecanone monooxygenase.
 
  
 0.956
EFL42807.1
FMN reductase.
 
 
  0.787
EFL38625.1
Cytochrome P450-SU2.
    
  0.760
EFL41631.1
Cytochrome P450-SU2.
    
  0.760
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
   
 
  0.744
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
   
 
  0.744
EFL37475.1
Taurine ABC transporter, permease.
  
 
  0.733
EFL37252.1
Conserved hypothetical protein.
       0.728
EFL43010.1
Bifunctional P-450/NADPH-P450 reductase; Truncated CDS; unextendable partial coding region; Belongs to the cytochrome P450 family.
    
 0.725
EFL38663.1
3-mercaptopyruvate sulfurtransferase.
  
  
  0.710
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.