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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37272.1ISL3 family transposase; Truncated CDS. (260 aa)    
Predicted Functional Partners:
EFL37262.1
Transposase.
     0.815
EFL37271.1
Hypothetical protein.
       0.505
EFL37256.1
ISMsm2, transposase.
 
     0.497
EFL37270.1
Acetyltransferase.
       0.493
EFL37316.1
IS4 family transposase.
  
   
 0.473
EFL43094.1
Conserved hypothetical protein.
  
     0.465
EFL43523.1
ISMsm2, transposase.
 
     0.463
EFL39102.1
ISMsm2, transposase; Truncated CDS.
 
     0.462
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.
      
 0.441
EFL40120.1
Integrase; Belongs to the 'phage' integrase family.
  
   
 0.427
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.