STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL37291.1Conserved hypothetical protein. (615 aa)    
Predicted Functional Partners:
EFL39630.1
Lipopolysaccharide biosynthesis protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
 0.964
EFL38549.1
Glucosyltransferase.
  
 
 0.916
EFL41298.1
Transferase.
  
 
 0.916
EFL37288.1
Conserved hypothetical protein.
       0.878
EFL37292.1
HAD-superfamily hydrolase, subfamily IA.
       0.878
EFL39537.1
Transferase.
  
  
 0.835
EFL42524.1
Phosphoglucomutase/phosphomannomutase.
    
 0.832
EFL37290.1
Thymidylate synthase.
  
    0.811
EFL37289.1
Nodulation protein nolNO.
       0.792
EFL40874.1
UTP-glucose-1-phosphate uridylyltransferase.
  
 
 0.781
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.