STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37294.1Tat (twin-arginine translocation) pathway signal sequence domain-containing protein. (415 aa)    
Predicted Functional Partners:
EFL40102.1
Tetratricopeptide TPR_2.
  
     0.643
EFL37230.1
Aminoglycoside phosphotransferase.
 
     0.615
EFL39455.1
Conserved hypothetical protein.
  
     0.530
EFL39367.1
Fumarate hydratase, class I; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
     
  0.512
EFL40524.1
Aminoglycoside phosphotransferase.
  
     0.495
EFL39453.1
Conserved hypothetical protein.
  
     0.478
EFL37526.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
  
     0.467
EFL37931.1
Type I restriction system adenine methylase.
  
     0.458
EFL37231.1
Conserved hypothetical protein.
  
     0.444
EFL43267.1
LuxR-family transcriptional regulator.
  
     0.441
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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