Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL37321.1C terminus superfamily lantibiotic dehydratase. (1042 aa)    
Predicted Functional Partners:
EFL37320.1
Conserved hypothetical protein.
 
   
 0.955
EFL42336.1
Mucin-2.
 
   
 0.815
EFL43453.1
Conserved hypothetical protein.
 
   
 0.812
EFL42362.1
uroporphyrinogen-III C-methyltransferase; Belongs to the precorrin methyltransferase family.
  
 
 0.743
EFL39938.1
uroporphyrin-III C-methyltransferase/uroporphyrinogen-III synthase.
  
 
 0.718
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.688
EFL37319.1
Transposase.
       0.631
EFL39262.1
Thiazole biosynthesis adenylyltransferase ThiF.
    
 0.628
EFL41606.1
Phosphoglycerate mutase.
    
  0.620
EFL42116.1
ABC transporter, ATP-binding protein.
  
    0.541
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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