STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37397.1Endo-1,4-beta-xylanase A. (193 aa)    
Predicted Functional Partners:
EFL42491.1
Chitinase 63; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.823
EFL42797.1
Peptidase, S1E (streptogrisin A) subfamily.
  
     0.772
EFL42800.1
Conserved hypothetical protein.
  
  
 0.740
EFL38106.1
Tail lysozyme.
  
    0.704
EFL38112.1
Phage tail sheath protein.
 
  
 0.680
EFL39414.1
Exochitinase 1; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.680
EFL39076.1
Chitinase 63.
  
  
 0.675
EFL38104.1
Secreted protein.
 
    0.653
EFL37469.1
Endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
  
  0.593
EFL37692.1
Chitinase.
  
  
  0.572
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.