STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37397.1Endo-1,4-beta-xylanase A. (193 aa)    
Predicted Functional Partners:
EFL42491.1
Chitinase 63; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.802
EFL42797.1
Peptidase, S1E (streptogrisin A) subfamily.
  
     0.772
EFL42800.1
Conserved hypothetical protein.
  
    0.706
EFL38106.1
Tail lysozyme.
  
    0.673
EFL39076.1
Chitinase 63.
  
  
 0.666
EFL39414.1
Exochitinase 1; Belongs to the glycosyl hydrolase 18 family.
  
  
 0.628
EFL38104.1
Secreted protein.
 
    0.627
EFL38112.1
Phage tail sheath protein.
 
    0.617
EFL37469.1
Endo-1,4-beta-glucanase; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
  
  0.608
EFL37692.1
Chitinase.
  
  
 0.562
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.