Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL37402.1Beta-lactamase. (413 aa)    
Predicted Functional Partners:
EFL37301.1
Beta-lactamase.
  
     0.753
EFL37483.1
Beta-lactamase.
  
     0.753
EFL43432.1
Beta-lactamase.
  
     0.752
EFL39628.1
Beta-lactamase.
  
     0.731
EFL37401.1
3-oxoacyl-(acyl-carrier-protein) reductase.
       0.724
EFL37403.1
Cytochrome P450 family protein.
       0.720
EFL41669.1
Beta-lactamase; Truncated CDS.
  
     0.691
EFL37801.1
Cyclododecanone monooxygenase.
  
  
  0.595
EFL39616.1
GMP synthase.
     
 0.492
EFL39617.1
GMP synthase domain-containing protein.
     
 0.492
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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