STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37415.1Amidohydrolase 2. (361 aa)    
Predicted Functional Partners:
EFL42854.1
FldA protein.
    
 0.702
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
    
  0.683
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
    
  0.683
EFL38562.1
GlcNAc-PI de-N-acetylase.
     
  0.661
EFL39927.1
2-pyrone-4,6-dicarboxylate lactonase.
 
  
 0.520
EFL42004.1
3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit.
    
  0.519
EFL41495.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
  
     0.508
EFL42815.1
Cupin domain-containing protein.
 
  
  0.464
EFL37784.1
Tetracenomycin polyketide synthesis hydroxylase TcmG.
 
    0.436
EFL38430.1
Conserved hypothetical protein; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
    
 0.434
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.