Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL37426.1Integral membrane protein. (209 aa)    
Predicted Functional Partners:
EFL39612.1
Integral membrane protein.
    
  0.855
EFL38663.1
3-mercaptopyruvate sulfurtransferase.
     
  0.850
EFL40617.1
Thiosulfate sulfurtransferase.
     
  0.850
EFL40673.1
Integral membrane protein.
    
  0.745
EFL37427.1
Helix-turn-helix domain-containing protein.
 
     0.664
EFL37973.1
2-dehydropantoate 2-reductase.
   
 
  0.592
EFL37691.1
Conserved hypothetical protein; Truncated CDS.
  
     0.524
EFL37575.1
Conserved hypothetical protein.
     
  0.465
EFL43094.1
Conserved hypothetical protein.
     
  0.465
EFL43333.1
Alpha-1,2-mannosidase.
  
     0.460
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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