STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37426.1Integral membrane protein. (209 aa)    
Predicted Functional Partners:
EFL39612.1
Integral membrane protein.
    
  0.897
EFL40673.1
Integral membrane protein.
    
  0.714
EFL37427.1
Helix-turn-helix domain-containing protein.
 
     0.666
EFL37691.1
Conserved hypothetical protein; Truncated CDS.
  
     0.524
EFL37973.1
2-dehydropantoate 2-reductase.
   
 
  0.500
EFL43333.1
Alpha-1,2-mannosidase.
  
     0.460
EFL38412.1
Alpha-1,2-mannosidase.
  
     0.458
EFL37428.1
Flavodoxin.
       0.404
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.