STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37436.1Conserved hypothetical protein. (365 aa)    
Predicted Functional Partners:
EFL38465.1
anthraniloyl-CoA monooxygenase.
   
 0.666
EFL41789.1
Cyclase/dehydrase.
    
 
 0.623
EFL43073.1
Conserved hypothetical protein.
  
     0.616
EFL38734.1
Monooxygenase; Unextendable partial coding region.
  
 0.595
EFL41925.1
Methyltransferase domain-containing protein.
   
 
 0.576
EFL39468.1
Conserved hypothetical protein.
  
     0.570
EFL37437.1
Conserved hypothetical protein.
       0.556
EFL42744.1
M20/M25/M40 family peptidase; Unextendable partial coding region.
  
    0.553
EFL43289.1
Conserved hypothetical protein.
  
     0.546
EFL38437.1
Conserved hypothetical protein.
  
     0.541
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.