STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37451.1M23 peptidase domain-containing protein. (214 aa)    
Predicted Functional Partners:
EFL40170.1
M23/M37 family peptidase.
  
     0.769
EFL39781.1
Peptidase M23B.
  
     0.745
EFL40075.1
Penicillin-binding protein.
  
     0.563
EFL41258.1
beta-N-Acetylglucosaminidase.
  
 
  0.562
EFL40399.1
Penicillin-binding protein.
  
     0.560
EFL39378.1
Bifunctional penicillin-binding protein 1a/1b pona1.
  
     0.525
EFL41157.1
Penicillin-binding protein 1.
  
     0.524
EFL38717.1
GTP diphosphokinase.
  
     0.508
EFL39558.1
beta-N-Acetylglucosaminidase.
     
  0.500
EFL41109.1
beta-N-acetylhexosaminidase.
     
  0.500
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.