STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37453.1Conserved hypothetical protein. (338 aa)    
Predicted Functional Partners:
EFL37452.1
Hydrolase.
       0.572
EFL40728.1
Conserved hypothetical protein.
  
     0.543
EFL40290.1
Conserved hypothetical protein.
  
     0.540
EFL39718.1
Conserved hypothetical protein.
  
     0.534
EFL40288.1
Conserved hypothetical protein.
  
     0.520
EFL38436.1
Conserved hypothetical protein.
  
     0.481
EFL37451.1
M23 peptidase domain-containing protein.
      
0.432
EFL42708.1
Conserved hypothetical protein.
  
     0.430
EFL43023.1
Integral membrane protein.
  
     0.427
EFL40815.1
ADP-ribosylglycohydrolase.
  
     0.404
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.