STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL37459.1Conserved hypothetical protein. (259 aa)    
Predicted Functional Partners:
ribBA
3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.762
EFL43429.1
Conserved hypothetical protein.
  
     0.667
EFL42837.1
Aldo/keto reductase family oxidoreductase.
       0.552
EFL37458.1
Stage II sporulation protein E (SpoIIE).
       0.523
EFL43155.1
Cysteine desulfurase.
       0.522
EFL41570.1
S-layer domain-containing protein.
  
     0.514
EFL41495.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
  
     0.459
EFL40954.1
Extracellular deoxyribonuclease.
  
     0.447
EFL42189.1
Secreted protein.
  
  
  0.427
EFL42015.1
Endonuclease/exonuclease/phosphatase.
  
     0.418
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.