STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37491.1ATP/GTP-binding protein. (200 aa)    
Predicted Functional Partners:
EFL37489.1
roadblock/LC7 domain-containing protein.
 
   0.986
EFL37488.1
Sensor histidine kinase.
 
     0.966
EFL37490.1
Conserved hypothetical protein.
 
     0.960
EFL42276.1
roadblock/LC7 domain-containing protein.
 
   0.900
EFL38330.1
roadblock/LC7 domain-containing protein.
 
   0.899
EFL41614.1
roadblock/LC7 domain-containing protein.
 
   0.899
EFL37237.1
roadblock/LC7 domain-containing protein.
 
   0.897
EFL39454.1
roadblock/LC7 domain-containing protein.
 
   0.897
EFL42677.1
roadblock/LC7 domain-containing protein.
 
   0.897
EFL42514.1
roadblock/LC7 domain-containing protein.
 
   0.896
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.