Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL37500.1Xre family toxin-antitoxin system, antitoxin component. (291 aa)    
Predicted Functional Partners:
EFL37499.1
Conserved hypothetical protein.
 
     0.934
EFL41942.1
Toxin-antitoxin system, toxin component.
 
   
 0.841
EFL39033.1
Conserved hypothetical protein.
 
     0.791
EFL41943.1
Conserved hypothetical protein.
 
     0.791
EFL39715.1
Conserved hypothetical protein.
 
     0.790
EFL37918.1
Conserved hypothetical protein.
 
     0.778
EFL43109.1
Conserved hypothetical protein.
 
     0.775
EFL40021.1
Toxin-antitoxin system, toxin component.
  
     0.774
EFL43107.1
Toxin-antitoxin system, toxin component.
  
     0.774
EFL40834.1
Conserved hypothetical protein.
  
     0.772
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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