STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37524.1Conserved hypothetical protein. (316 aa)    
Predicted Functional Partners:
EFL37525.1
Hydrogen:quinone oxidoreductase.
 
 0.999
EFL37526.1
Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.
 
   
 0.953
EFL37531.1
Hydrogenase maturation protein HupD.
 
  
 0.939
EFL37533.1
Hydrogenase accessory protein HypB.
 
  
 0.928
EFL37527.1
Conserved hypothetical protein.
 
     0.926
EFL37528.1
Conserved hypothetical protein.
 
     0.926
EFL37534.1
Hydrogenase maturation protein HypF.
 
 
 
 0.903
EFL37529.1
Conserved hypothetical protein.
 
  
 0.888
EFL37536.1
Hydrogenase expression/formation protein HypD.
 
  
 0.885
EFL38537.1
Ferredoxin oxidoreductase, alpha subunit.
     
 0.874
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.