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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37532.1Hydrogenase nickel incorporation protein HypA. (92 aa)    
Predicted Functional Partners:
EFL37533.1
Hydrogenase accessory protein HypB.
 
 
 0.989
EFL37525.1
Hydrogen:quinone oxidoreductase.
 
 
 0.977
EFL39286.1
Mrp protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
   
   0.944
ureG
Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
  
 
 0.922
EFL40851.1
Secreted protein.
    
   0.831
EFL37535.1
Hydrogenase assembly chaperone HypC/HupF.
 
  
 0.650
EFL37531.1
Hydrogenase maturation protein HupD.
 
  
 0.642
EFL37530.1
Phage head-tail adaptor.
 
  
 0.637
EFL37534.1
Hydrogenase maturation protein HypF.
 
   
 0.628
EFL37524.1
Conserved hypothetical protein.
 
  
 0.621
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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