STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37533.1Hydrogenase accessory protein HypB. (275 aa)    
Predicted Functional Partners:
EFL37532.1
Hydrogenase nickel incorporation protein HypA.
 
 
 0.989
EFL37535.1
Hydrogenase assembly chaperone HypC/HupF.
 
  
 0.979
EFL37536.1
Hydrogenase expression/formation protein HypD.
 
  
 0.976
EFL37524.1
Conserved hypothetical protein.
 
  
 0.946
ureD
Urease accessory protein; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
  
 
 0.945
EFL37531.1
Hydrogenase maturation protein HupD.
 
   
 0.937
EFL37534.1
Hydrogenase maturation protein HypF.
 
   
 0.920
EFL37525.1
Hydrogen:quinone oxidoreductase.
 
   
 0.911
ureC
Urease, alpha subunit.
  
  
 0.833
ureA
Urease, gamma subunit; Belongs to the urease gamma subunit family.
  
  
 0.827
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.