STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37542.1Beta-1,3-glucanase. (410 aa)    
Predicted Functional Partners:
EFL42491.1
Chitinase 63; Belongs to the glycosyl hydrolase 18 family.
 
 
 0.702
EFL37692.1
Chitinase.
     0.650
EFL39076.1
Chitinase 63.
  
    0.583
EFL43152.1
Glucan endo-1,3-beta-glucosidase.
 
   
 0.580
EFL43023.1
Integral membrane protein.
       0.552
EFL43086.1
Glycosyl hydrolase.
   
 0.520
EFL40282.1
Extracellular small neutral protease; Belongs to the peptidase M7 family.
  
     0.519
EFL43124.1
Peptidase, S1E (streptogrisin A) subfamily.
 
     0.493
EFL37984.1
Cellulose 1,4-beta-cellobiosidase; Belongs to the glycosyl hydrolase family 6.
  
  
 0.481
EFL37543.1
Hypothetical protein.
       0.478
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.