STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37575.1Conserved hypothetical protein. (225 aa)    
Predicted Functional Partners:
EFL37576.1
WGR domain-containing protein; Truncated CDS; unextendable partial coding region.
 
    0.955
EFL37572.1
Radical SAM domain-containing protein.
 
    0.907
EFL37573.1
Coproporphyrinogen III oxidase.
 
    0.899
EFL37574.1
Conserved hypothetical protein.
 
     0.899
EFL37578.1
Conserved hypothetical protein.
 
     0.893
EFL37579.1
Conserved hypothetical protein.
 
     0.893
EFL41895.1
Glutamate synthase large subunit.
    
 0.857
EFL37577.1
WGR domain-containing protein; Truncated CDS; unextendable partial coding region.
 
    0.813
EFL37455.1
Carboxylate-amine ligase.
    
 0.774
EFL39327.1
Membrane protein.
  
     0.589
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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