STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37576.1WGR domain-containing protein; Truncated CDS; unextendable partial coding region. (240 aa)    
Predicted Functional Partners:
EFL37575.1
Conserved hypothetical protein.
 
    0.955
EFL37572.1
Radical SAM domain-containing protein.
 
    0.876
EFL37573.1
Coproporphyrinogen III oxidase.
 
    0.822
EFL37574.1
Conserved hypothetical protein.
 
     0.808
EFL37578.1
Conserved hypothetical protein.
 
     0.764
EFL37579.1
Conserved hypothetical protein.
 
     0.739
EFL39327.1
Membrane protein.
  
     0.549
EFL41229.1
Conserved hypothetical protein.
  
     0.510
EFL41673.1
N- superfamily bifunctional DNA primase/polymerase.
  
     0.475
EFL39949.1
Conserved hypothetical protein.
  
     0.470
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.