STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37578.1Conserved hypothetical protein. (108 aa)    
Predicted Functional Partners:
EFL37579.1
Conserved hypothetical protein.
 
     0.944
EFL37575.1
Conserved hypothetical protein.
 
     0.888
EFL37577.1
WGR domain-containing protein; Truncated CDS; unextendable partial coding region.
 
     0.870
EFL37572.1
Radical SAM domain-containing protein.
 
     0.868
EFL37574.1
Conserved hypothetical protein.
 
     0.863
EFL37573.1
Coproporphyrinogen III oxidase.
 
     0.841
EFL37576.1
WGR domain-containing protein; Truncated CDS; unextendable partial coding region.
 
     0.764
EFL43099.1
Conserved hypothetical protein.
  
     0.727
EFL37616.1
Conserved hypothetical protein.
  
     0.691
EFL37994.1
Conserved hypothetical protein.
  
     0.583
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.