Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL37579.1Conserved hypothetical protein. (342 aa)    
Predicted Functional Partners:
EFL37578.1
Conserved hypothetical protein.
 
     0.944
EFL37575.1
Conserved hypothetical protein.
 
     0.888
EFL37572.1
Radical SAM domain-containing protein.
 
     0.865
EFL37573.1
Coproporphyrinogen III oxidase.
 
     0.837
EFL37577.1
WGR domain-containing protein; Truncated CDS; unextendable partial coding region.
 
     0.815
EFL37574.1
Conserved hypothetical protein.
 
     0.813
EFL42799.1
PE-PGRS family protein.
    
   0.775
EFL37576.1
WGR domain-containing protein; Truncated CDS; unextendable partial coding region.
 
     0.739
EFL43099.1
Conserved hypothetical protein.
  
     0.735
EFL37616.1
Conserved hypothetical protein.
  
     0.703
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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