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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37580.1Conserved hypothetical protein. (156 aa)    
Predicted Functional Partners:
EFL38274.1
Regulatory protein.
 
   0.836
EFL41175.1
Conserved hypothetical protein.
  
   0.817
EFL39330.1
Regulatory protein.
  
   0.809
EFL37501.1
Regulatory protein.
  
   0.796
EFL41940.1
Conserved hypothetical protein.
 
 
 0.794
EFL39443.1
Serine phosphatase.
 
 
 0.770
EFL43106.1
Conserved hypothetical protein.
  
     0.760
EFL40020.1
Conserved hypothetical protein.
  
     0.755
EFL38467.1
Conserved hypothetical protein.
  
   0.754
EFL39038.1
Conserved hypothetical protein.
  
     0.754
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.