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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37617.1Taurine dioxygenase. (321 aa)    
Predicted Functional Partners:
EFL42807.1
FMN reductase.
 
 
  0.942
EFL38302.1
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.909
EFL40837.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
  
 
 0.905
EFL39909.1
FMN reductase.
   
 
  0.898
EFL43516.1
Hydrogenase, gamma subunit.
   
 
  0.891
EFL38307.1
ABC-type nitrate/taurine/sulfonate/bicarbonate transport system, ATPase component.
 
 
  0.828
EFL38532.1
ABC-type nitrate/taurine/sulfonate/bicarbonate transport system, ATPase component.
 
 
  0.827
EFL37801.1
Cyclododecanone monooxygenase.
 
  
 0.806
EFL42808.1
NtaA/SnaA/SoxA family monooxygenase.
 
  0.802
EFL37475.1
Taurine ABC transporter, permease.
  
 
 0.797
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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