STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37640.1Conserved hypothetical protein. (123 aa)    
Predicted Functional Partners:
EFL37639.1
Conserved hypothetical protein.
       0.825
EFL41711.1
Alpha-amylase.
  
    0.600
EFL41803.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
   
    0.591
EFL38333.1
Secreted substrate-binding protein.
  
    0.574
EFL41123.1
Permease binding-protein component.
  
    0.574
EFL40548.1
Lipoprotein.
    
   0.567
EFL37642.1
Stage II sporulation protein E (SpoIIE).
 
    0.519
EFL37644.1
sigma-B regulator RsbR.
  
    0.500
EFL40504.1
Stress responsive A/B Barrel Domain superfamily protein.
  
     0.500
EFL37645.1
Anti-sigma factor B antagonist.
  
    0.499
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.