STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37643.1Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. (128 aa)    
Predicted Functional Partners:
EFL37646.1
Anti-sigma B factor RsbT.
  
 
 0.892
EFL43034.1
Membrane protein.
 
 
 0.792
EFL37620.1
Integral membrane sensor protein.
 
 
 0.786
EFL38029.1
Integral membrane sensor protein.
 
 
 0.781
EFL42638.1
Integral membrane sensor protein.
 
 
 0.766
EFL38761.1
Regulatory protein.
 
 
 0.758
EFL39340.1
Stage II sporulation protein E (SpoIIE).
 
     0.732
EFL37642.1
Stage II sporulation protein E (SpoIIE).
 
     0.684
EFL41273.1
Conserved hypothetical protein.
 
 
 0.679
EFL41093.1
Conserved hypothetical protein.
 
 
 0.674
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.