STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37663.1Metallo-beta-lactamase superfamily protein. (248 aa)    
Predicted Functional Partners:
EFL37664.1
Conserved hypothetical protein.
       0.818
EFL37662.1
Alkylated DNA repair protein; Unextendable partial coding region.
  
    0.752
EFL37660.1
3-ketosteroid-delta-1-dehydrogenase.
       0.695
EFL37661.1
TetR-family regulator.
       0.695
EFL39262.1
Thiazole biosynthesis adenylyltransferase ThiF.
  
 0.673
EFL42427.1
Metallo-beta-lactamase.
     
  0.670
EFL41799.1
D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
  0.599
EFL40349.1
Metallo-beta-lactamase superfamily protein.
   
  0.584
EFL43509.1
Metallo-beta-lactamase superfamily protein.
   
  0.584
EFL42744.1
M20/M25/M40 family peptidase; Unextendable partial coding region.
       0.552
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.