STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37705.1Conserved hypothetical protein. (516 aa)    
Predicted Functional Partners:
EFL37913.1
Integral membrane protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.967
EFL37910.1
Glycosyl transferase.
 
  
 0.815
EFL37908.1
Conserved hypothetical protein.
 
     0.794
EFL37911.1
6-pyruvoyl tetrahydropterin synthase.
 
     0.791
EFL37912.1
Zinc-binding dehydrogenase family oxidoreductase.
 
     0.773
EFL37909.1
Conserved hypothetical protein.
  
     0.772
EFL42703.1
Secreted protein.
  
     0.608
EFL40561.1
Riboflavin/cytosine deaminase.
 
    0.587
EFL41717.1
Secreted protein.
  
     0.572
EFL37593.1
Membrane protein.
  
     0.571
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.