STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37707.1Transcriptional regulator. (195 aa)    
Predicted Functional Partners:
EFL39187.1
Riboflavin biosynthesis protein RibD domain-containing protein.
 
     0.767
EFL40702.1
Conserved hypothetical protein.
     
 0.717
EFL40705.1
Transcriptional regulator.
  
  
 0.659
EFL39186.1
Conserved hypothetical protein.
       0.572
EFL43015.1
Conserved hypothetical protein.
  
     0.559
EFL40664.1
Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.
   
    0.551
EFL40781.1
Iron-dependent repressor IdeR.
   
    0.551
EFL41738.1
Conserved hypothetical protein.
   
    0.551
EFL39440.1
Toxin-antitoxin system, toxin component.
  
     0.528
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
     
 0.513
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.