STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37708.1Beta-lactamase. (370 aa)    
Predicted Functional Partners:
EFL41258.1
beta-N-Acetylglucosaminidase.
 
 0.971
EFL42213.1
YzbB.
    0.970
EFL38484.1
Sugar hydrolase.
 
 0.955
EFL40010.1
D-alanyl-D-alanine carboxypeptidase.
     
 0.712
EFL40818.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.661
EFL37479.1
Secreted protein.
     0.575
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
  
 0.558
EFL37801.1
Cyclododecanone monooxygenase.
  
  
  0.553
EFL38025.1
LD-carboxypeptidase superfamily protein.
 
     0.538
EFL39616.1
GMP synthase.
     
 0.528
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.