STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37710.1Integral membrane protein. (424 aa)    
Predicted Functional Partners:
EFL37711.1
CapA family protein.
       0.742
EFL40217.1
Regulatory protein; Truncated CDS.
  
     0.617
EFL40215.1
Regulatory protein.
  
     0.594
EFL40958.1
Integral membrane protein.
  
     0.592
EFL40493.1
Dolichyl-phosphate beta-glucosyltransferase.
  
    0.573
EFL42011.1
RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.572
EFL37877.1
Regulatory protein.
  
     0.549
EFL42404.1
Conserved hypothetical protein.
  
     0.535
EFL37958.1
Type I phosphodiesterase/nucleotide pyrophosphatase.
   
 0.507
EFL38673.1
Phosphodiesterase; Unextendable partial coding region.
   
 0.507
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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