STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37710.1Integral membrane protein. (424 aa)    
Predicted Functional Partners:
EFL37711.1
CapA family protein.
       0.740
EFL40217.1
Regulatory protein; Truncated CDS.
  
     0.617
EFL40215.1
Regulatory protein.
  
     0.594
EFL40958.1
Integral membrane protein.
  
     0.592
EFL40493.1
Dolichyl-phosphate beta-glucosyltransferase.
  
    0.552
EFL42011.1
RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
       0.552
EFL37877.1
Regulatory protein.
  
     0.549
EFL42404.1
Conserved hypothetical protein.
  
     0.535
EFL37378.1
Pentapeptide repeats-containing protein; Pentapeptide repeats (8 copies) (3 repeats).
  
     0.473
EFL38148.1
Guanyl-specific ribonuclease Sa3 (RNase Sa3).
  
     0.455
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.