STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37716.1CBS domain-containing protein. (457 aa)    
Predicted Functional Partners:
EFL37715.1
Membrane protein containing CBS domain.
 
   
0.916
EFL37713.1
Integral membrane protein.
 
   
0.799
EFL39616.1
GMP synthase.
    
 0.727
EFL39617.1
GMP synthase domain-containing protein.
    
 0.727
EFL42486.1
Integral membrane protein.
 
   
0.667
EFL42610.1
Membrane protein.
 
   
0.650
EFL37714.1
Integral membrane transporter with CBS domains.
 
    
0.518
EFL39050.1
Asp-rich hydrophilic protein.
   
    0.448
EFL37717.1
SpoOM protein.
       0.446
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
 
    0.432
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.