Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL37727.1PAS/PAC sensor protein. (563 aa)    
Predicted Functional Partners:
EFL38760.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 0.998
EFL38759.1
Sensor histidine kinase/response regulator; Overlaps another CDS with the same product name.
  
 0.995
EFL37443.1
PAS/PAC sensor hybrid histidine kinase.
 0.994
EFL38929.1
Sensory box/GGDEF domain/EAL domain-containing protein.
 
 0.992
EFL37442.1
PAS/PAC sensor hybrid histidine kinase.
  
 0.991
EFL42695.1
Hypothetical protein.
  
 0.990
EFL41940.1
Conserved hypothetical protein.
 
 
 0.918
EFL42638.1
Integral membrane sensor protein.
 
0.912
EFL38761.1
Regulatory protein.
 
0.911
EFL37620.1
Integral membrane sensor protein.
 
0.910
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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