STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL37748.1GntR-family regulatory protein. (235 aa)    
Predicted Functional Partners:
EFL38678.1
Transcriptional regulator.
  
     0.771
EFL38695.1
Sporulation transcription factor, WhiH.
  
  
 0.737
EFL42243.1
GntR family transcriptional regulator.
  
  
 0.714
EFL38343.1
Transcriptional regulator.
  
  
 0.708
EFL38424.1
GntR family transcriptional regulator.
  
  
 0.660
EFL42112.1
GntR family transcriptional regulator.
  
  
 0.616
EFL37749.1
Proline racemase; Belongs to the proline racemase family.
 
   
 0.591
EFL37768.1
L-asparagine operon repressor (GntR family).
  
  
 0.559
EFL37751.1
Secreted oxidase.
 
    0.550
EFL42228.1
GntR family transcription regulator.
  
  
 0.532
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.