Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL37762.1Integral membrane protein. (200 aa)    
Predicted Functional Partners:
EFL37761.1
Oxidoreductase.
       0.638
EFL40031.1
PE-PGRS family protein.
  
     0.515
EFL40299.1
Membrane protein.
  
     0.513
EFL37760.1
Oxidoreductase, molybdopterin binding.
       0.492
EFL37763.1
Acetyl xylan esterase.
       0.480
EFL42694.1
Conserved hypothetical protein.
  
     0.456
EFL41893.1
Secreted protein.
  
     0.450
EFL38994.1
GNAT family acetyltransferase.
  
     0.448
EFL43220.1
Membrane protein.
  
     0.420
EFL42331.1
Aminotransferase, class IV.
  
     0.416
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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