STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL37763.1Acetyl xylan esterase. (175 aa)    
Predicted Functional Partners:
EFL37845.1
D-amino acid oxidase.
     
  0.772
EFL40101.1
D-amino acid oxidase.
     
  0.772
EFL37761.1
Oxidoreductase.
       0.697
EFL37760.1
Oxidoreductase, molybdopterin binding.
       0.659
EFL37289.1
Nodulation protein nolNO.
     
  0.595
EFL37608.1
Nodulation protein nolNO.
     
  0.595
EFL40108.1
Nodulation protein nolNO.
     
  0.595
EFL38804.1
Multiple sugar transport system substrate-binding protein.
 
     0.554
EFL38393.1
Beta-mannosidase.
 
     0.534
EFL37762.1
Integral membrane protein.
       0.480
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.