Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL37769.1Delta 6 fatty acid desaturase. (348 aa)    
Predicted Functional Partners:
EFL40331.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.860
EFL43279.1
phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
 
 0.860
EFL40936.1
stearoyl-CoA 9-desaturase.
   
 0.848
EFL37860.1
stearoyl-CoA 9-desaturase.
     
 0.838
EFL43010.1
Bifunctional P-450/NADPH-P450 reductase; Truncated CDS; unextendable partial coding region; Belongs to the cytochrome P450 family.
    
 0.797
EFL43484.1
Polyketide synthase.
  
 
 0.691
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
  
 
 0.595
EFL37540.1
Condensation domain-containing protein.
  
 
 0.595
EFL38138.1
Dehydrogenase.
     
 0.577
EFL42670.1
Conserved hypothetical protein.
       0.552
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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