STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37773.1Galactosidase. (519 aa)    
Predicted Functional Partners:
EFL41514.1
Glycoside Hydrolase family 43.
  
  
 0.777
EFL38261.1
Conserved hypothetical protein; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.776
EFL37354.1
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.773
EFL42036.1
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
  
  
 0.758
EFL37778.1
LacI family transcriptional regulator.
 
     0.745
EFL41494.1
alpha-N-arabinofuranosidase.
  
 
 0.726
EFL37774.1
Beta-galactosidase; Truncated CDS.
 
  
 0.720
EFL40607.1
Pectinesterase/pectate lyase protein.
  
   
 0.710
EFL42042.1
Endo-1,4-beta-xylanase.
  
  
 0.684
EFL38548.1
Mucin-2.
  
  
 0.663
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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