STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37792.1O-methyltransferase. (342 aa)    
Predicted Functional Partners:
EFL37360.1
Pentachlorophenol monooxygenase.
  
  
  0.864
EFL37793.1
Secreted protein.
     
 0.824
EFL43486.1
Non-ribosomal peptide synthetase/polyketide synthase Ta1; Truncated CDS; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
  
 0.811
EFL37539.1
Condensation domain-containing protein; Unextendable partial coding region.
    
 0.771
EFL37540.1
Condensation domain-containing protein.
    
 0.771
EFL41632.1
Dimodular nonribosomal peptide synthetase; Truncated CDS.
    
 0.762
EFL39371.1
Syringomycin synthetase.
    
 0.758
EFL38629.1
Enantio-pyochelin synthetase F; Overlaps another CDS with the same product name.
    
 0.747
EFL38628.1
Enantio-pyochelin synthetase F; Overlaps another CDS with the same product name.
    
 0.746
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
 0.699
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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