Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL37799.1TetR family transcriptional regulator. (200 aa)    
Predicted Functional Partners:
EFL43334.1
Secreted protein.
  
     0.724
EFL43335.1
Regulatory protein.
  
     0.565
EFL37800.1
acyl-CoA dehydrogenase.
       0.552
EFL37796.1
Conserved hypothetical protein.
  
     0.515
EFL39226.1
TetR-family transcriptional regulator.
  
     0.479
EFL42176.1
Secreted lipase.
  
     0.477
EFL41590.1
TetR family transcriptional regulator.
  
   
 0.475
EFL39548.1
Integral membrane protein.
  
     0.427
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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