Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL37813.1Metallo-beta-lactamase. (397 aa)    
Predicted Functional Partners:
EFL37814.1
Conserved hypothetical protein.
     
 0.891
EFL37815.1
Secreted peptidase.
     
 0.747
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
 
 
   0.721
EFL37817.1
Conserved hypothetical protein.
     
 0.569
EFL38045.1
Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
     0.562
EFL37411.1
Glutamate dehydrogenase, NAD-specific; Truncated CDS; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
       0.552
EFL40477.1
GCN5 N-acetyltransferase.
       0.552
EFL37812.1
Membrane protein.
       0.543
EFL37811.1
roadblock/LC7 domain-containing protein.
       0.524
EFL37810.1
Conserved hypothetical protein.
       0.486
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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