Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFL37830.1ABC transporter membrane component. (104 aa)    
Predicted Functional Partners:
EFL37829.1
ABC transporter ATP-binding protein.
 
 0.998
EFL41059.1
ABC transporter ATP-binding protein.
 
 0.995
EFL37831.1
Glycosyltransferase.
 
  
 0.693
EFL41068.1
CDP-glycerol:polyglycerol phosphate glycero-phosphotransferase.
 
  
 0.614
EFL37834.1
Nucleotide sugar-1-phosphate transferase.
 
     0.593
EFL38231.1
HAD-superfamily hydrolase subfamily IIIA; Truncated CDS.
  
  
 0.591
EFL41069.1
CDP-glycerol:polyglycerol phosphate glycero-phosphotransferase.
 
  
 0.582
EFL41058.1
CDP-glycerol:polyglycerol phosphate glycero-phosphotransferase.
 
  
 0.568
EFL42116.1
ABC transporter, ATP-binding protein.
    
  0.568
EFL40261.1
Conserved hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.567
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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