STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37838.1Cobalt-zinc-cadmium efflux permease. (312 aa)    
Predicted Functional Partners:
idi
Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).
       0.744
EFL37834.1
Nucleotide sugar-1-phosphate transferase.
       0.692
EFL37835.1
Transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.692
EFL37503.1
PE-PGRS family protein; Belongs to the V-ATPase 116 kDa subunit family.
    
   0.686
EFL43503.1
Polyketide synthase type I.
  
 
 0.628
EFL37837.1
UDP-glucose 4-epimerase.
       0.553
EFL37831.1
Glycosyltransferase.
       0.552
EFL37832.1
Transferase.
       0.552
EFL37833.1
Glycerol 1-phosphate dehydrogenase.
       0.552
EFL37801.1
Cyclododecanone monooxygenase.
  
    0.534
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.