Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EFL37852.1DifB protein. (140 aa)    
Predicted Functional Partners:
EFL37853.1
Saccharopine dehydrogenase.
       0.779
EFL37851.1
alpha-methylacyl-CoA racemase; Belongs to the CoA-transferase III family.
       0.771
EFL42691.1
Conserved hypothetical protein.
  
  
 0.628
EFL42295.1
Conserved hypothetical protein.
  
     0.602
EFL41297.1
Integral membrane protein.
  
     0.523
EFL39213.1
Epi-isozizaene synthase.
 
     0.522
EFL43235.1
Conserved hypothetical protein; Unextendable partial coding region.
  
     0.516
EFL41980.1
Integral membrane.
  
     0.512
EFL37849.1
Fatty oxidation complex, alpha subunit.
       0.497
EFL38326.1
Germacradienol/germacrene D synthase.
 
     0.471
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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