Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EFL37853.1Saccharopine dehydrogenase. (211 aa)    
Predicted Functional Partners:
EFL37852.1
DifB protein.
       0.779
EFL37851.1
alpha-methylacyl-CoA racemase; Belongs to the CoA-transferase III family.
 
     0.750
EFL40887.1
Monooxygenase.
  
     0.700
EFL37849.1
Fatty oxidation complex, alpha subunit.
 
   
 0.666
folE
GTP cyclohydrolase I.
 
      0.659
EFL37370.1
Methyltransferase type 11.
   
    0.631
EFL41244.1
Long-chain specific acyl-CoA dehydrogenase.
 
     0.596
EFL42200.1
Oxidoreductase, molybdopterin-binding.
  
     0.586
EFL42110.1
Enoyl-(acyl-carrier-protein) reductase.
      
 0.538
EFL43338.1
Fatty oxidation complex, alpha subunit.
 
   
 0.536
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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