EFL37856.1 protein (Streptomyces griseoflavus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

EFL37856.1

Regulatory protein. (137 aa)

Predicted Functional Partners:

EFL42446.1

0.742

EFL37855.1

0.704

EFL37854.1

0.703

EFL39278.1

0.690

EFL40628.1

0.646

EFL42085.1

0.625

EFL41092.1

0.620

EFL41456.1

0.615

EFL41780.1

0.603

EFL42623.1

0.594

Your Current Organism:

Streptomyces griseoflavus

NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFL37854.1	EFL37855.1	SSRG_00658	SSRG_00659	Conserved hypothetical protein.	Oxidoreductase; Unextendable partial coding region.	0.754
EFL37854.1	EFL37856.1	SSRG_00658	SSRG_00660	Conserved hypothetical protein.	Regulatory protein.	0.703
EFL37855.1	EFL37854.1	SSRG_00659	SSRG_00658	Oxidoreductase; Unextendable partial coding region.	Conserved hypothetical protein.	0.754
EFL37855.1	EFL37856.1	SSRG_00659	SSRG_00660	Oxidoreductase; Unextendable partial coding region.	Regulatory protein.	0.704
EFL37856.1	EFL37854.1	SSRG_00660	SSRG_00658	Regulatory protein.	Conserved hypothetical protein.	0.703
EFL37856.1	EFL37855.1	SSRG_00660	SSRG_00659	Regulatory protein.	Oxidoreductase; Unextendable partial coding region.	0.704
EFL37856.1	EFL39278.1	SSRG_00660	SSRG_02082	Regulatory protein.	Conserved hypothetical protein.	0.690
EFL37856.1	EFL40628.1	SSRG_00660	SSRG_03432	Regulatory protein.	AmfC protein.	0.646
EFL37856.1	EFL41092.1	SSRG_00660	SSRG_03896	Regulatory protein.	Xre family toxin-antitoxin system, antitoxin component.	0.620
EFL37856.1	EFL41456.1	SSRG_00660	SSRG_04260	Regulatory protein.	Xre family toxin-antitoxin system, antitoxin component.	0.615
EFL37856.1	EFL41780.1	SSRG_00660	SSRG_04584	Regulatory protein.	Conserved hypothetical protein; Truncated CDS; unextendable partial coding region.	0.603
EFL37856.1	EFL42085.1	SSRG_00660	SSRG_04889	Regulatory protein.	Transcriptional regulator.	0.625
EFL37856.1	EFL42446.1	SSRG_00660	SSRG_05250	Regulatory protein.	Helix-turn-helix domain-containing protein.	0.742
EFL37856.1	EFL42623.1	SSRG_00660	SSRG_05427	Regulatory protein.	Xre family toxin-antitoxin system, antitoxin component.	0.594
EFL39278.1	EFL37856.1	SSRG_02082	SSRG_00660	Conserved hypothetical protein.	Regulatory protein.	0.690
EFL39278.1	EFL42085.1	SSRG_02082	SSRG_04889	Conserved hypothetical protein.	Transcriptional regulator.	0.441
EFL39278.1	EFL42446.1	SSRG_02082	SSRG_05250	Conserved hypothetical protein.	Helix-turn-helix domain-containing protein.	0.440
EFL40628.1	EFL37856.1	SSRG_03432	SSRG_00660	AmfC protein.	Regulatory protein.	0.646
EFL40628.1	EFL42085.1	SSRG_03432	SSRG_04889	AmfC protein.	Transcriptional regulator.	0.470
EFL40628.1	EFL42446.1	SSRG_03432	SSRG_05250	AmfC protein.	Helix-turn-helix domain-containing protein.	0.679

page 1 of 3

Server load: low (16%) [HD]

Permalink

Network

Neighborhood

Textmining

Co-occurrence

Experiments

Fusion

Databases

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About