Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EFL37871.1Secreted protein. (317 aa)    
Predicted Functional Partners:
EFL38576.1
3-oxoadipate:succinyl-CoA transferase, B subunit.
  
 0.917
EFL43173.1
3-oxoadipate CoA-transferase subunit B.
  
 0.917
EFL43328.1
succinyl-CoA:3-ketoacid-coenzyme A transferase, B subunit.
  
 0.917
EFL37870.1
Hypothetical protein.
       0.773
EFL37876.1
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase.
  
 
 0.754
EFL37849.1
Fatty oxidation complex, alpha subunit.
  
 
 0.670
EFL38396.1
Fatty acid oxidation complex alpha-subunit.
  
 
 0.670
EFL43338.1
Fatty oxidation complex, alpha subunit.
  
 
 0.670
EFL37869.1
S-(hydroxymethyl)glutathione dehydrogenase.
       0.630
EFL37868.1
DNA ligase.
       0.525
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
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