close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFL37873.1Protocatechuate 3,4-dioxygenase, beta subunit. (256 aa)    
Predicted Functional Partners:
EFL37874.1
Protocatechuate 3,4-dioxygenase, alpha subunit.
 
 
 0.999
EFL37875.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
 
 0.999
EFL37876.1
3-oxoadipate enol-lactone hydrolase/4-carboxymuconolactone decarboxylase.
 
 
 0.992
EFL37899.1
4-hydroxyphenylpyruvate dioxygenase.
 
  
 0.819
EFL37872.1
MarR family transcriptional regulator.
     
 0.786
EFL38084.1
3-oxoadipate enol-lactone hydrolase.
  
  
 0.728
EFL43172.1
3-oxoadipate CoA-transferase subunit A.
 
 
 0.723
EFL43327.1
succinyl-CoA:3-ketoacid-coenzyme A transferase, A subunit.
  
 
 0.670
EFL43173.1
3-oxoadipate CoA-transferase subunit B.
 
 
 0.664
EFL37900.1
Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family.
 
   
 0.662
Your Current Organism:
Streptomyces griseoflavus
NCBI taxonomy Id: 467200
Other names: S. griseoflavus Tu4000, Streptomyces griseoflavus Tu4000, Streptomyces griseoflavus str. Tu4000, Streptomyces griseoflavus strain Tu4000
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.